/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011949_1894891_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 27431258 | 100.00 % | 13715629 | 100.00 % | 13715629 | 100.00 % |
| General Reads | 21468471 | 78.26 % | 10804075 | 78.77 % | 10664396 | 77.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 12 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5962765 | 21.74 % | 2911542 | 21.23 % | 3051223 | 22.25 % |
| Bisulfite_reads C2T | 11075285 | 40.37 % | 5572277 | 40.63 % | 5503008 | 40.12 % |
| Bisulfite_reads G2A | 10393208 | 37.89 % | 5231810 | 38.14 % | 5161398 | 37.63 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8270491 |
| Average Unique | 60.30 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 693107610 | 32.81 % | 287652291 | 27.24 % | 405455319 | 38.39 % |
| Base Counts Overall C | 349362351 | 16.54 % | 100013875 | 9.47 % | 249348476 | 23.61 % |
| Base Counts Overall G | 355171338 | 16.82 % | 251990803 | 23.86 % | 103180535 | 9.77 % |
| Base Counts Overall T | 686627125 | 32.51 % | 402574601 | 38.12 % | 284052524 | 26.90 % |
| Base Counts Overall N | 27938442 | 1.32 % | 13871863 | 1.31 % | 14066579 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 10167332 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13715629 |
| 76 | 13715629 |
| Insert Size Histogram |
|---|
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