/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011950_1894892_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 31472364 | 100.00 % | 15736182 | 100.00 % | 15736182 | 100.00 % |
| General Reads | 17129351 | 54.43 % | 8617771 | 54.76 % | 8511580 | 54.09 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20 | 0.00 % | 12 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14342993 | 45.57 % | 7118399 | 45.24 % | 7224594 | 45.91 % |
| Bisulfite_reads C2T | 8841995 | 28.09 % | 4446673 | 28.26 % | 4395322 | 27.93 % |
| Bisulfite_reads G2A | 8287376 | 26.33 % | 4171110 | 26.51 % | 4116266 | 26.16 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6618085 |
| Average Unique | 42.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 668510862 | 27.59 % | 318769310 | 26.31 % | 349741552 | 28.86 % |
| Base Counts Overall C | 522667909 | 21.57 % | 248550694 | 20.51 % | 274117215 | 22.62 % |
| Base Counts Overall G | 535243176 | 22.09 % | 278458257 | 22.98 % | 256784919 | 21.19 % |
| Base Counts Overall T | 664931331 | 27.44 % | 349998977 | 28.89 % | 314932354 | 25.99 % |
| Base Counts Overall N | 32018750 | 1.32 % | 15908776 | 1.31 % | 16109974 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8098960 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15736182 |
| 76 | 15736182 |
| Insert Size Histogram |
|---|
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