/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011952_1894894_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 26992480 | 100.00 % | 13496240 | 100.00 % | 13496240 | 100.00 % |
| General Reads | 19799213 | 73.35 % | 9964885 | 73.83 % | 9834328 | 72.87 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 13 | 0.00 % | 7 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7193254 | 26.65 % | 3531348 | 26.17 % | 3661906 | 27.13 % |
| Bisulfite_reads C2T | 10184686 | 37.73 % | 5124558 | 37.97 % | 5060128 | 37.49 % |
| Bisulfite_reads G2A | 9614540 | 35.62 % | 4840334 | 35.86 % | 4774206 | 35.37 % |
| Concept | Value |
|---|---|
| Unique Fragments | 7851592 |
| Average Unique | 58.18 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 586820692 | 28.23 % | 286389563 | 27.56 % | 300431129 | 28.91 % |
| Base Counts Overall C | 435458452 | 20.95 % | 213831330 | 20.58 % | 221627122 | 21.33 % |
| Base Counts Overall G | 438626571 | 21.10 % | 223280041 | 21.49 % | 215346530 | 20.72 % |
| Base Counts Overall T | 590055964 | 28.39 % | 302064534 | 29.07 % | 287991430 | 27.71 % |
| Base Counts Overall N | 27459281 | 1.32 % | 13645012 | 1.31 % | 13814269 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 9523008 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13496240 |
| 76 | 13496240 |
| Insert Size Histogram |
|---|
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