/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011954_1894896_2

BACK

SAMPLE K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs LANE EXTERNAL-K011954_1894896_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 25200860 100.00 % 12600430 100.00 % 12600430 100.00 %
General Reads 12675999 50.30 % 6382857 50.66 % 6293142 49.94 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 12524861 49.70 % 6217573 49.34 % 6307288 50.06 %
Bisulfite_reads C2T 6519894 25.87 % 3282702 26.05 % 3237192 25.69 %
Bisulfite_reads G2A 6156105 24.43 % 3100155 24.60 % 3055950 24.25 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 4868020
Average Unique 38.63 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 555893295 28.65 % 252292913 26.00 % 303600382 31.29 %
Base Counts Overall C 399125357 20.57 % 177115073 18.25 % 222010284 22.88 %
Base Counts Overall G 401556901 20.69 % 222970188 22.98 % 178586713 18.41 %
Base Counts Overall T 558256336 28.77 % 305117355 31.45 % 253138981 26.09 %
Base Counts Overall N 25634331 1.32 % 12737581 1.31 % 12896750 1.33 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 5967919



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011954_1894896_2.mapq.png



Read Length

Read Length Reads
76 12600430
76 12600430



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011954_1894896_2.isize.png