/EXTERNAL BLUEPRINT/K011973_K011977_K011978_K011979_K011980_K011981_K011982_K011983_K011984_K011985_K011986_K011987_K011988_K011989_K011990_K011991_K011992_K011993_K011994_K011995_K011996_K011997_22_lane_gembs/EXTERNAL-K011980_1894922_2
BACK
SAMPLE K011973_K011977_K011978_K011979_K011980_K011981_K011982_K011983_K011984_K011985_K011986_K011987_K011988_K011989_K011990_K011991_K011992_K011993_K011994_K011995_K011996_K011997_22_lane_gembs LANE EXTERNAL-K011980_1894922_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 26701226 | 100.00 % | 13350613 | 100.00 % | 13350613 | 100.00 % |
| General Reads | 1882145 | 7.05 % | 945800 | 7.08 % | 936345 | 7.01 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 24819079 | 92.95 % | 12404812 | 92.92 % | 12414267 | 92.99 % |
| Bisulfite_reads C2T | 976433 | 3.66 % | 490384 | 3.67 % | 486049 | 3.64 % |
| Bisulfite_reads G2A | 905714 | 3.39 % | 455417 | 3.41 % | 450297 | 3.37 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 660572 |
| Average Unique | 4.95 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 651600548 | 31.69 % | 220592768 | 21.46 % | 431007780 | 41.93 % |
| Base Counts Overall C | 359004930 | 17.46 % | 65678710 | 6.39 % | 293326220 | 28.53 % |
| Base Counts Overall G | 373862067 | 18.18 % | 301953855 | 29.37 % | 71908212 | 6.99 % |
| Base Counts Overall T | 644333203 | 31.34 % | 426283307 | 41.47 % | 218049896 | 21.21 % |
| Base Counts Overall N | 27193654 | 1.32 % | 13488561 | 1.31 % | 13705093 | 1.33 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 844749 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 13350613 |
| 76 | 13350613 |
Insert Size Plot
| Insert Size Histogram |
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