/EXTERNAL BLUEPRINT/K011973_K011977_K011978_K011979_K011980_K011981_K011982_K011983_K011984_K011985_K011986_K011987_K011988_K011989_K011990_K011991_K011992_K011993_K011994_K011995_K011996_K011997_22_lane_gembs/EXTERNAL-K011984_1894926_2
BACK
SAMPLE K011973_K011977_K011978_K011979_K011980_K011981_K011982_K011983_K011984_K011985_K011986_K011987_K011988_K011989_K011990_K011991_K011992_K011993_K011994_K011995_K011996_K011997_22_lane_gembs LANE EXTERNAL-K011984_1894926_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 26124866 | 100.00 % | 13062433 | 100.00 % | 13062433 | 100.00 % |
| General Reads | 2320369 | 8.88 % | 1165978 | 8.93 % | 1154391 | 8.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 23804497 | 91.12 % | 11896455 | 91.07 % | 11908042 | 91.16 % |
| Bisulfite_reads C2T | 1198830 | 4.59 % | 602229 | 4.61 % | 596601 | 4.57 % |
| Bisulfite_reads G2A | 1121539 | 4.29 % | 563749 | 4.32 % | 557790 | 4.27 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 847316 |
| Average Unique | 6.49 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 636334335 | 31.63 % | 212979037 | 21.17 % | 423355298 | 42.09 % |
| Base Counts Overall C | 353150421 | 17.56 % | 63431025 | 6.31 % | 289719396 | 28.80 % |
| Base Counts Overall G | 366989214 | 18.24 % | 297257356 | 29.55 % | 69731858 | 6.93 % |
| Base Counts Overall T | 628608030 | 31.25 % | 418961204 | 41.65 % | 209646826 | 20.84 % |
| Base Counts Overall N | 26532682 | 1.32 % | 13178719 | 1.31 % | 13353963 | 1.33 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 1050926 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 13062433 |
| 76 | 13062433 |
Insert Size Plot
| Insert Size Histogram |
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