/EXTERNAL BLUEPRINT/K011974_K011975_K011998_K011999_4_lane_gembs/EXTERNAL-K011974_1894916_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20442346 | 100.00 % | 10221173 | 100.00 % | 10221173 | 100.00 % |
| General Reads | 6192957 | 30.29 % | 3110171 | 30.43 % | 3082786 | 30.16 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15 | 0.00 % | 6 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14249374 | 69.71 % | 7110996 | 69.57 % | 7138378 | 69.84 % |
| Bisulfite_reads C2T | 3196382 | 15.64 % | 1604645 | 15.70 % | 1591737 | 15.57 % |
| Bisulfite_reads G2A | 2996590 | 14.66 % | 1505532 | 14.73 % | 1491058 | 14.59 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2372392 |
| Average Unique | 23.21 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 489337989 | 31.09 % | 178514938 | 22.68 % | 310823051 | 39.49 % |
| Base Counts Overall C | 285931572 | 18.17 % | 65985611 | 8.38 % | 219945961 | 27.95 % |
| Base Counts Overall G | 292991823 | 18.61 % | 223048473 | 28.34 % | 69943350 | 8.89 % |
| Base Counts Overall T | 485007098 | 30.81 % | 309078668 | 39.27 % | 175928430 | 22.35 % |
| Base Counts Overall N | 20792160 | 1.32 % | 10402631 | 1.32 % | 10389529 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2926119 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10221173 |
| 76 | 10221173 |
| Insert Size Histogram |
|---|
 |