/EXTERNAL BLUEPRINT/K011974_K011975_K011998_K011999_4_lane_gembs/EXTERNAL-K011975_1894917_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 12756204 | 100.00 % | 6378102 | 100.00 % | 6378102 | 100.00 % |
| General Reads | 4911905 | 38.51 % | 2469215 | 38.71 % | 2442690 | 38.30 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7844299 | 61.49 % | 3908887 | 61.29 % | 3935412 | 61.70 % |
| Bisulfite_reads C2T | 2537423 | 19.89 % | 1275225 | 19.99 % | 1262198 | 19.79 % |
| Bisulfite_reads G2A | 2374482 | 18.61 % | 1193990 | 18.72 % | 1180492 | 18.51 % |
| Concept | Value |
|---|---|
| Unique Fragments | 1893431 |
| Average Unique | 29.69 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 317773323 | 32.35 % | 114850774 | 23.39 % | 202922549 | 41.32 % |
| Base Counts Overall C | 165477756 | 16.85 % | 34042865 | 6.93 % | 131434891 | 26.76 % |
| Base Counts Overall G | 170837525 | 17.39 % | 134373745 | 27.36 % | 36463780 | 7.42 % |
| Base Counts Overall T | 315164416 | 32.09 % | 201354213 | 41.00 % | 113810203 | 23.17 % |
| Base Counts Overall N | 12974688 | 1.32 % | 6492257 | 1.32 % | 6482431 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2329249 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 6378102 |
| 76 | 6378102 |
| Insert Size Histogram |
|---|
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