/EXTERNAL BLUEPRINT/K011974_K011975_K011998_K011999_4_lane_gembs/EXTERNAL-K011998_1894940_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 32102352 | 100.00 % | 16051176 | 100.00 % | 16051176 | 100.00 % |
| General Reads | 22141760 | 68.97 % | 11118944 | 69.27 % | 11022816 | 68.67 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9960590 | 31.03 % | 4932231 | 30.73 % | 5028359 | 31.33 % |
| Bisulfite_reads C2T | 11446337 | 35.66 % | 5746718 | 35.80 % | 5699619 | 35.51 % |
| Bisulfite_reads G2A | 10695425 | 33.32 % | 5372227 | 33.47 % | 5323198 | 33.16 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8438760 |
| Average Unique | 52.57 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 844233726 | 34.15 % | 314414904 | 25.44 % | 529818822 | 42.87 % |
| Base Counts Overall C | 374671279 | 15.16 % | 62956971 | 5.09 % | 311714308 | 25.22 % |
| Base Counts Overall G | 385478103 | 15.59 % | 317461611 | 25.69 % | 68016492 | 5.50 % |
| Base Counts Overall T | 834837563 | 33.77 % | 524765219 | 42.46 % | 310072344 | 25.09 % |
| Base Counts Overall N | 32660433 | 1.32 % | 16341847 | 1.32 % | 16318586 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 10417031 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 16051176 |
| 76 | 16051176 |
| Insert Size Histogram |
|---|
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