/EXTERNAL BLUEPRINT/K011974_K011975_K011998_K011999_4_lane_gembs/EXTERNAL-K011999_1894941_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 37061732 | 100.00 % | 18530866 | 100.00 % | 18530866 | 100.00 % |
| General Reads | 25159822 | 67.89 % | 12636102 | 68.19 % | 12523720 | 67.58 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 56 | 0.00 % | 28 | 0.00 % | 28 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11901854 | 32.11 % | 5894736 | 31.81 % | 6007118 | 32.42 % |
| Bisulfite_reads C2T | 13012754 | 35.11 % | 6533894 | 35.26 % | 6478860 | 34.96 % |
| Bisulfite_reads G2A | 12147124 | 32.78 % | 6102236 | 32.93 % | 6044888 | 32.62 % |
| Concept | Value |
|---|---|
| Unique Fragments | 9616716 |
| Average Unique | 51.90 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 970797554 | 34.02 % | 369273402 | 25.88 % | 601524152 | 42.16 % |
| Base Counts Overall C | 436993536 | 15.31 % | 78949730 | 5.53 % | 358043806 | 25.09 % |
| Base Counts Overall G | 449015374 | 15.73 % | 364882407 | 25.57 % | 84132967 | 5.90 % |
| Base Counts Overall T | 959255541 | 33.61 % | 594910939 | 41.69 % | 364344602 | 25.53 % |
| Base Counts Overall N | 37691359 | 1.32 % | 18860204 | 1.32 % | 18831155 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 11876972 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 18530866 |
| 76 | 18530866 |
| Insert Size Histogram |
|---|
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