/EXTERNAL BLUEPRINT/methylation/K011974_K011975_K011998_K011999_4_lane_gembs
BACK
SAMPLE K011974_K011975_K011998_K011999_4_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
12032822 |
1085 |
0.01 % |
| NonRefCpG |
750892 |
4 |
0.00 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
2185720 |
15.67 % |
119 |
4.40 % |
204671 |
24.84 % |
1 |
5.03 % |
| Intermediate (0.3-0.7) |
5129544 |
36.78 % |
660 |
24.30 % |
313088 |
37.99 % |
5 |
24.96 % |
| Methylated (0.7-1) |
6629575 |
47.54 % |
1939 |
71.30 % |
306267 |
37.17 % |
14 |
70.01 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.670 |
|
0.840 |
|
0.570 |
|
0.830 |
|