/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010431_1798673_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010431_1798673_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 15856098 | 100.00 % | 7928049 | 100.00 % | 7928049 | 100.00 % |
| General Reads | 13570221 | 85.58 % | 6891412 | 86.92 % | 6678809 | 84.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 58 | 0.00 % | 29 | 0.00 % | 29 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2285819 | 14.42 % | 1036608 | 13.08 % | 1249211 | 15.76 % |
| Bisulfite_reads C2T | 7006756 | 44.19 % | 3556847 | 44.86 % | 3449909 | 43.52 % |
| Bisulfite_reads G2A | 6563523 | 41.39 % | 3334594 | 42.06 % | 3228929 | 40.73 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5030967 |
| Average Unique | 63.46 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 429489977 | 35.64 % | 164552984 | 27.31 % | 264936993 | 43.97 % |
| Base Counts Overall C | 164482774 | 13.65 % | 20277404 | 3.37 % | 144205370 | 23.93 % |
| Base Counts Overall G | 177537735 | 14.73 % | 150405498 | 24.96 % | 27132237 | 4.50 % |
| Base Counts Overall T | 415002358 | 34.44 % | 259345996 | 43.04 % | 155656362 | 25.83 % |
| Base Counts Overall N | 18550604 | 1.54 % | 7949842 | 1.32 % | 10600762 | 1.76 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6417452 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 7928049 |
| 75 | 7928049 |
Insert Size Plot
| Insert Size Histogram |
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