/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010432_1798674_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010432_1798674_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 21738272 | 100.00 % | 10869136 | 100.00 % | 10869136 | 100.00 % |
| General Reads | 14072072 | 64.73 % | 7131584 | 65.61 % | 6940488 | 63.86 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 43 | 0.00 % | 24 | 0.00 % | 19 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7666157 | 35.27 % | 3737528 | 34.39 % | 3928629 | 36.14 % |
| Bisulfite_reads C2T | 7268565 | 33.44 % | 3682161 | 33.88 % | 3586404 | 33.00 % |
| Bisulfite_reads G2A | 6803550 | 31.30 % | 3449447 | 31.74 % | 3354103 | 30.86 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5357834 |
| Average Unique | 49.29 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 532392752 | 32.23 % | 227947524 | 27.59 % | 304445228 | 36.86 % |
| Base Counts Overall C | 271710589 | 16.45 % | 81494244 | 9.87 % | 190216345 | 23.03 % |
| Base Counts Overall G | 289495896 | 17.52 % | 196743893 | 23.82 % | 92752003 | 11.23 % |
| Base Counts Overall T | 533125131 | 32.27 % | 308967025 | 37.40 % | 224158106 | 27.14 % |
| Base Counts Overall N | 25384304 | 1.54 % | 10901650 | 1.32 % | 14482654 | 1.75 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6693088 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 10869136 |
| 75 | 10869136 |
Insert Size Plot
| Insert Size Histogram |
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