/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010433_1798675_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010433_1798675_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17832202 | 100.00 % | 8916101 | 100.00 % | 8916101 | 100.00 % |
| General Reads | 13944367 | 78.20 % | 7066220 | 79.25 % | 6878147 | 77.14 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 24 | 0.00 % | 12 | 0.00 % | 12 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3887811 | 21.80 % | 1849869 | 20.75 % | 2037942 | 22.86 % |
| Bisulfite_reads C2T | 7263817 | 40.73 % | 3679307 | 41.27 % | 3584510 | 40.20 % |
| Bisulfite_reads G2A | 6680574 | 37.46 % | 3386925 | 37.99 % | 3293649 | 36.94 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5275733 |
| Average Unique | 59.17 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 407658130 | 30.08 % | 189239942 | 27.93 % | 218418188 | 32.23 % |
| Base Counts Overall C | 250145750 | 18.46 % | 95442845 | 14.08 % | 154702905 | 22.83 % |
| Base Counts Overall G | 267649286 | 19.75 % | 160463814 | 23.68 % | 107185472 | 15.82 % |
| Base Counts Overall T | 408946572 | 30.18 % | 223534645 | 32.99 % | 185411927 | 27.36 % |
| Base Counts Overall N | 20847614 | 1.54 % | 8942430 | 1.32 % | 11905184 | 1.76 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6641374 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 8916101 |
| 75 | 8916101 |
Insert Size Plot
| Insert Size Histogram |
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