/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010434_1798676_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010434_1798676_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17943588 | 100.00 % | 8971794 | 100.00 % | 8971794 | 100.00 % |
| General Reads | 14859261 | 82.81 % | 7541365 | 84.06 % | 7317896 | 81.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 56 | 0.00 % | 28 | 0.00 % | 28 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3084271 | 17.19 % | 1430401 | 15.94 % | 1653870 | 18.43 % |
| Bisulfite_reads C2T | 7673135 | 42.76 % | 3892817 | 43.39 % | 3780318 | 42.14 % |
| Bisulfite_reads G2A | 7186182 | 40.05 % | 3648576 | 40.67 % | 3537606 | 39.43 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5709903 |
| Average Unique | 63.64 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 461486606 | 33.84 % | 187919739 | 27.56 % | 273566867 | 40.12 % |
| Base Counts Overall C | 202531645 | 14.85 % | 42625031 | 6.25 % | 159906614 | 23.45 % |
| Base Counts Overall G | 217163406 | 15.92 % | 165838311 | 24.32 % | 51325095 | 7.53 % |
| Base Counts Overall T | 461567124 | 33.85 % | 276475057 | 40.55 % | 185092067 | 27.15 % |
| Base Counts Overall N | 20963907 | 1.54 % | 8998206 | 1.32 % | 11965701 | 1.75 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 7091607 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 8971794 |
| 75 | 8971794 |
Insert Size Plot
| Insert Size Histogram |
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