/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010436_1798678_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010436_1798678_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19570340 | 100.00 % | 9785170 | 100.00 % | 9785170 | 100.00 % |
| General Reads | 17042874 | 87.09 % | 8641017 | 88.31 % | 8401857 | 85.86 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 54 | 0.00 % | 27 | 0.00 % | 27 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2527412 | 12.91 % | 1144126 | 11.69 % | 1383286 | 14.14 % |
| Bisulfite_reads C2T | 8800362 | 44.97 % | 4460664 | 45.59 % | 4339698 | 44.35 % |
| Bisulfite_reads G2A | 8242566 | 42.12 % | 4180380 | 42.72 % | 4062186 | 41.51 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6519244 |
| Average Unique | 66.62 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 514695645 | 34.60 % | 203027859 | 27.30 % | 311667786 | 41.91 % |
| Base Counts Overall C | 211022913 | 14.19 % | 33437338 | 4.50 % | 177585575 | 23.88 % |
| Base Counts Overall G | 226169169 | 15.21 % | 184528879 | 24.81 % | 41640290 | 5.60 % |
| Base Counts Overall T | 512589767 | 34.46 % | 312865478 | 42.07 % | 199724289 | 26.86 % |
| Base Counts Overall N | 22868346 | 1.54 % | 9813366 | 1.32 % | 13054980 | 1.76 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 8123437 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 9785170 |
| 75 | 9785170 |
Insert Size Plot
| Insert Size Histogram |
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