/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010438_1798680_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010438_1798680_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17596366 | 100.00 % | 8798183 | 100.00 % | 8798183 | 100.00 % |
| General Reads | 15827547 | 89.95 % | 8066194 | 91.68 % | 7761353 | 88.22 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28 | 0.00 % | 14 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 1768791 | 10.05 % | 731975 | 8.32 % | 1036816 | 11.78 % |
| Bisulfite_reads C2T | 8164230 | 46.40 % | 4158674 | 47.27 % | 4005556 | 45.53 % |
| Bisulfite_reads G2A | 7663345 | 43.55 % | 3907534 | 44.41 % | 3755811 | 42.69 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6132340 |
| Average Unique | 69.70 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 428264458 | 32.02 % | 187983683 | 28.11 % | 240280775 | 35.93 % |
| Base Counts Overall C | 219650086 | 16.42 % | 69594465 | 10.41 % | 150055621 | 22.44 % |
| Base Counts Overall G | 236360241 | 17.67 % | 155715752 | 23.29 % | 80644489 | 12.06 % |
| Base Counts Overall T | 432482493 | 32.34 % | 246543875 | 36.87 % | 185938618 | 27.81 % |
| Base Counts Overall N | 20566538 | 1.54 % | 8824133 | 1.32 % | 11742405 | 1.76 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 7561896 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 8798183 |
| 75 | 8798183 |
Insert Size Plot
| Insert Size Histogram |
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