/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010439_1798681_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010439_1798681_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 42074936 | 100.00 % | 21037468 | 100.00 % | 21037468 | 100.00 % |
| General Reads | 39632113 | 94.19 % | 20084096 | 95.47 % | 19548017 | 92.92 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 49 | 0.00 % | 25 | 0.00 % | 24 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2442774 | 5.81 % | 953347 | 4.53 % | 1489427 | 7.08 % |
| Bisulfite_reads C2T | 20496911 | 48.72 % | 10383734 | 49.36 % | 10113177 | 48.07 % |
| Bisulfite_reads G2A | 19135251 | 45.48 % | 9700387 | 46.11 % | 9434864 | 44.85 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 15195788 |
| Average Unique | 72.23 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1137153184 | 35.56 % | 443637077 | 27.75 % | 693516107 | 43.38 % |
| Base Counts Overall C | 427834333 | 13.38 % | 44026355 | 2.75 % | 383807978 | 24.01 % |
| Base Counts Overall G | 456847405 | 14.29 % | 397067861 | 24.83 % | 59779544 | 3.74 % |
| Base Counts Overall T | 1126691692 | 35.23 % | 693017381 | 43.34 % | 433674311 | 27.12 % |
| Base Counts Overall N | 49168522 | 1.54 % | 21098894 | 1.32 % | 28069628 | 1.76 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 18902761 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 21037468 |
| 75 | 21037468 |
Insert Size Plot
| Insert Size Histogram |
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