/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs/EXTERNAL-K010440_1798682_2
BACK
SAMPLE K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs LANE EXTERNAL-K010440_1798682_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 55804028 | 100.00 % | 27902014 | 100.00 % | 27902014 | 100.00 % |
| General Reads | 53071271 | 95.10 % | 26868334 | 96.30 % | 26202937 | 93.91 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 36 | 0.00 % | 18 | 0.00 % | 18 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2732721 | 4.90 % | 1033662 | 3.70 % | 1699059 | 6.09 % |
| Bisulfite_reads C2T | 27419744 | 49.14 % | 13877905 | 49.74 % | 13541839 | 48.53 % |
| Bisulfite_reads G2A | 25651563 | 45.97 % | 12990447 | 46.56 % | 12661116 | 45.38 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 20461301 |
| Average Unique | 73.33 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1519496334 | 35.83 % | 586588007 | 27.66 % | 932908327 | 43.99 % |
| Base Counts Overall C | 557330675 | 13.14 % | 50480888 | 2.38 % | 506849787 | 23.90 % |
| Base Counts Overall G | 594293597 | 14.01 % | 524650393 | 24.74 % | 69643204 | 3.28 % |
| Base Counts Overall T | 1504872250 | 35.48 % | 930849793 | 43.90 % | 574022457 | 27.07 % |
| Base Counts Overall N | 65113272 | 1.54 % | 27983983 | 1.32 % | 37129289 | 1.75 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 25388361 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 27902014 |
| 75 | 27902014 |
Insert Size Plot
| Insert Size Histogram |
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