/EXTERNAL BLUEPRINT/K010430_K010431_K010432_K010433_K010434_K010435_K010436_K010437_K010438_K010439_K010440_11_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 360151024 | 100.00 % | 180075512 | 100.00 % | 180075512 | 100.00 % |
| General Reads | 323559232 | 89.84 % | 164010805 | 91.08 % | 159548427 | 88.60 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 423 | 0.00 % | 214 | 0.00 % | 209 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 36591369 | 10.16 % | 16064493 | 8.92 % | 20526876 | 11.40 % |
| Bisulfite_reads C2T | 167285643 | 46.45 % | 84768180 | 47.07 % | 82517463 | 45.82 % |
| Bisulfite_reads G2A | 156274012 | 43.39 % | 79242839 | 44.01 % | 77031173 | 42.78 % |
| Concept | Value |
|---|---|
| Unique Fragments | 123417141 |
| Average Unique | 68.54 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 9531688222 | 34.82 % | 3801920934 | 27.78 % | 5729767288 | 41.87 % |
| Base Counts Overall C | 3865221047 | 14.12 % | 635486862 | 4.64 % | 3229734185 | 23.60 % |
| Base Counts Overall G | 4134550588 | 15.11 % | 3343754052 | 24.43 % | 790796536 | 5.78 % |
| Base Counts Overall T | 9419426492 | 34.41 % | 5723977191 | 41.82 % | 3695449301 | 27.00 % |
| Base Counts Overall N | 420591475 | 1.54 % | 180599873 | 1.32 % | 239991602 | 1.75 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9423397889556423 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 153724346 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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