/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010442_1798684_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 21868890 | 100.00 % | 10934445 | 100.00 % | 10934445 | 100.00 % |
| General Reads | 16145980 | 73.83 % | 8155554 | 74.59 % | 7990426 | 73.08 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 0 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5722908 | 26.17 % | 2778891 | 25.41 % | 2944017 | 26.92 % |
| Bisulfite_reads C2T | 8315895 | 38.03 % | 4199209 | 38.40 % | 4116686 | 37.65 % |
| Bisulfite_reads G2A | 7830087 | 35.80 % | 3956345 | 36.18 % | 3873742 | 35.43 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6284812 |
| Average Unique | 57.48 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 538380002 | 32.39 % | 221666403 | 26.67 % | 316713599 | 38.11 % |
| Base Counts Overall C | 274186514 | 16.50 % | 71140906 | 8.56 % | 203045608 | 24.43 % |
| Base Counts Overall G | 290226820 | 17.46 % | 210437045 | 25.32 % | 79789775 | 9.60 % |
| Base Counts Overall T | 536200021 | 32.26 % | 316710068 | 38.11 % | 219489953 | 26.41 % |
| Base Counts Overall N | 23042283 | 1.39 % | 11063398 | 1.33 % | 11978885 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7753088 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 10934445 |
| 75 | 10934445 |
| Insert Size Histogram |
|---|
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