/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010443_1798685_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19137904 | 100.00 % | 9568952 | 100.00 % | 9568952 | 100.00 % |
| General Reads | 14272694 | 74.58 % | 7206298 | 75.31 % | 7066396 | 73.85 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 0 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4865209 | 25.42 % | 2362654 | 24.69 % | 2502555 | 26.15 % |
| Bisulfite_reads C2T | 7362574 | 38.47 % | 3716763 | 38.84 % | 3645811 | 38.10 % |
| Bisulfite_reads G2A | 6910121 | 36.11 % | 3489535 | 36.47 % | 3420586 | 35.75 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5531835 |
| Average Unique | 57.81 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 480950660 | 33.07 % | 191210741 | 26.29 % | 289739919 | 39.84 % |
| Base Counts Overall C | 230740787 | 15.86 % | 51424758 | 7.07 % | 179316029 | 24.66 % |
| Base Counts Overall G | 243700213 | 16.76 % | 185466615 | 25.50 % | 58233598 | 8.01 % |
| Base Counts Overall T | 478925965 | 32.93 % | 289456708 | 39.80 % | 189469257 | 26.05 % |
| Base Counts Overall N | 20163079 | 1.39 % | 9681530 | 1.33 % | 10481549 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6846295 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 9568952 |
| 75 | 9568952 |
| Insert Size Histogram |
|---|
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