/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010444_1798686_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22947172 | 100.00 % | 11473586 | 100.00 % | 11473586 | 100.00 % |
| General Reads | 18317806 | 79.83 % | 9274385 | 80.83 % | 9043421 | 78.82 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4629366 | 20.17 % | 2199201 | 19.17 % | 2430165 | 21.18 % |
| Bisulfite_reads C2T | 9448280 | 41.17 % | 4782096 | 41.68 % | 4666184 | 40.67 % |
| Bisulfite_reads G2A | 8869526 | 38.65 % | 4492289 | 39.15 % | 4377237 | 38.15 % |
| Concept | Value |
|---|---|
| Unique Fragments | 7084546 |
| Average Unique | 61.75 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 584427620 | 33.51 % | 234836429 | 26.93 % | 349591191 | 40.09 % |
| Base Counts Overall C | 267994112 | 15.37 % | 55867995 | 6.41 % | 212126117 | 24.33 % |
| Base Counts Overall G | 285498894 | 16.37 % | 220727136 | 25.31 % | 64771758 | 7.43 % |
| Base Counts Overall T | 581887940 | 33.37 % | 348953539 | 40.02 % | 232934401 | 26.71 % |
| Base Counts Overall N | 24176506 | 1.39 % | 11607437 | 1.33 % | 12569069 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8758799 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 11473586 |
| 75 | 11473586 |
| Insert Size Histogram |
|---|
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