/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010445_1798687_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 21287208 | 100.00 % | 10643604 | 100.00 % | 10643604 | 100.00 % |
| General Reads | 14708017 | 69.09 % | 7433884 | 69.84 % | 7274133 | 68.34 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6579191 | 30.91 % | 3209720 | 30.16 % | 3369471 | 31.66 % |
| Bisulfite_reads C2T | 7591741 | 35.66 % | 3835709 | 36.04 % | 3756032 | 35.29 % |
| Bisulfite_reads G2A | 7116276 | 33.43 % | 3598175 | 33.81 % | 3518101 | 33.05 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5712185 |
| Average Unique | 53.67 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 506503862 | 31.31 % | 213596533 | 26.41 % | 292907329 | 36.21 % |
| Base Counts Overall C | 282955466 | 17.49 % | 87326648 | 10.80 % | 195628818 | 24.18 % |
| Base Counts Overall G | 299472700 | 18.51 % | 202449328 | 25.03 % | 97023372 | 11.99 % |
| Base Counts Overall T | 506472337 | 31.31 % | 294772624 | 36.44 % | 211699713 | 26.17 % |
| Base Counts Overall N | 22423443 | 1.39 % | 10768771 | 1.33 % | 11654672 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7050383 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 10643604 |
| 75 | 10643604 |
| Insert Size Histogram |
|---|
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