/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010446_1798688_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 23598222 | 100.00 % | 11799111 | 100.00 % | 11799111 | 100.00 % |
| General Reads | 18879777 | 80.01 % | 9532679 | 80.79 % | 9347098 | 79.22 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 1 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4718444 | 19.99 % | 2266431 | 19.21 % | 2452013 | 20.78 % |
| Bisulfite_reads C2T | 9738554 | 41.27 % | 4915847 | 41.66 % | 4822707 | 40.87 % |
| Bisulfite_reads G2A | 9141224 | 38.74 % | 4616833 | 39.13 % | 4524391 | 38.35 % |
| Concept | Value |
|---|---|
| Unique Fragments | 7396993 |
| Average Unique | 62.69 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 594990493 | 33.18 % | 238762557 | 26.63 % | 356227936 | 39.73 % |
| Base Counts Overall C | 281931170 | 15.72 % | 62426799 | 6.96 % | 219504371 | 24.48 % |
| Base Counts Overall G | 297870624 | 16.61 % | 227193448 | 25.34 % | 70677176 | 7.88 % |
| Base Counts Overall T | 593801047 | 33.11 % | 356411970 | 39.75 % | 237389077 | 26.47 % |
| Base Counts Overall N | 24871538 | 1.39 % | 11937662 | 1.33 % | 12933876 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 9099213 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 11799111 |
| 75 | 11799111 |
| Insert Size Histogram |
|---|
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