/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010447_1798689_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17181814 | 100.00 % | 8590907 | 100.00 % | 8590907 | 100.00 % |
| General Reads | 13586218 | 79.07 % | 6895971 | 80.27 % | 6690247 | 77.88 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7 | 0.00 % | 3 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3595589 | 20.93 % | 1694933 | 19.73 % | 1900656 | 22.12 % |
| Bisulfite_reads C2T | 6996649 | 40.72 % | 3549602 | 41.32 % | 3447047 | 40.12 % |
| Bisulfite_reads G2A | 6589576 | 38.35 % | 3346372 | 38.95 % | 3243204 | 37.75 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5264261 |
| Average Unique | 61.28 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 409494030 | 31.36 % | 180411969 | 27.63 % | 229082061 | 35.09 % |
| Base Counts Overall C | 225620805 | 17.28 % | 74738108 | 11.45 % | 150882697 | 23.11 % |
| Base Counts Overall G | 239524710 | 18.34 % | 155869631 | 23.87 % | 83655079 | 12.81 % |
| Base Counts Overall T | 413073537 | 31.63 % | 233197343 | 35.72 % | 179876194 | 27.55 % |
| Base Counts Overall N | 18104782 | 1.39 % | 8691881 | 1.33 % | 9412901 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6503895 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8590907 |
| 75 | 8590907 |
| Insert Size Histogram |
|---|
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