/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010448_1798690_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20708162 | 100.00 % | 10354081 | 100.00 % | 10354081 | 100.00 % |
| General Reads | 16186290 | 78.16 % | 8188885 | 79.09 % | 7997405 | 77.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4521872 | 21.84 % | 2165196 | 20.91 % | 2356676 | 22.76 % |
| Bisulfite_reads C2T | 8337867 | 40.26 % | 4216640 | 40.72 % | 4121227 | 39.80 % |
| Bisulfite_reads G2A | 7848423 | 37.90 % | 3972245 | 38.36 % | 3876178 | 37.44 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6328410 |
| Average Unique | 61.12 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 500437597 | 31.80 % | 211626621 | 26.89 % | 288810976 | 36.70 % |
| Base Counts Overall C | 267008341 | 16.97 % | 81133162 | 10.31 % | 185875179 | 23.62 % |
| Base Counts Overall G | 281564879 | 17.89 % | 191673170 | 24.36 % | 89891709 | 11.42 % |
| Base Counts Overall T | 502995877 | 31.96 % | 292001942 | 37.11 % | 210993935 | 26.81 % |
| Base Counts Overall N | 21813618 | 1.39 % | 10475261 | 1.33 % | 11338357 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7791858 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 10354081 |
| 75 | 10354081 |
| Insert Size Histogram |
|---|
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