/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010449_1798691_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 47684258 | 100.00 % | 23842129 | 100.00 % | 23842129 | 100.00 % |
| General Reads | 43985778 | 92.24 % | 22187974 | 93.06 % | 21797804 | 91.43 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 19 | 0.00 % | 8 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3698461 | 7.76 % | 1654147 | 6.94 % | 2044314 | 8.57 % |
| Bisulfite_reads C2T | 22707959 | 47.62 % | 11451139 | 48.03 % | 11256820 | 47.21 % |
| Bisulfite_reads G2A | 21277838 | 44.62 % | 10736843 | 45.03 % | 10540995 | 44.21 % |
| Concept | Value |
|---|---|
| Unique Fragments | 16988196 |
| Average Unique | 71.25 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1274460411 | 35.17 % | 498230806 | 27.50 % | 776229605 | 42.84 % |
| Base Counts Overall C | 505776949 | 13.96 % | 76250230 | 4.21 % | 429526719 | 23.70 % |
| Base Counts Overall G | 534218011 | 14.74 % | 445142167 | 24.57 % | 89075844 | 4.92 % |
| Base Counts Overall T | 1259305173 | 34.75 % | 768256253 | 42.40 % | 491048920 | 27.10 % |
| Base Counts Overall N | 50243064 | 1.39 % | 24122348 | 1.33 % | 26120716 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 20990069 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 23842129 |
| 75 | 23842129 |
| Insert Size Histogram |
|---|
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