/EXTERNAL BLUEPRINT/K010441_K010442_K010443_K010444_K010445_K010446_K010447_K010448_K010449_K010450_10_lane_gembs/EXTERNAL-K010450_1798692_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 62162386 | 100.00 % | 31081193 | 100.00 % | 31081193 | 100.00 % |
| General Reads | 56611930 | 91.07 % | 28552633 | 91.86 % | 28059297 | 90.28 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5550448 | 8.93 % | 2528556 | 8.14 % | 3021892 | 9.72 % |
| Bisulfite_reads C2T | 29206238 | 46.98 % | 14726770 | 47.38 % | 14479468 | 46.59 % |
| Bisulfite_reads G2A | 27405700 | 44.09 % | 13825867 | 44.48 % | 13579833 | 43.69 % |
| Concept | Value |
|---|---|
| Unique Fragments | 21987294 |
| Average Unique | 70.74 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1661550837 | 35.17 % | 649629565 | 27.50 % | 1011921272 | 42.84 % |
| Base Counts Overall C | 658367475 | 13.94 % | 94017113 | 3.98 % | 564350362 | 23.89 % |
| Base Counts Overall G | 691577664 | 14.64 % | 581787334 | 24.63 % | 109790330 | 4.65 % |
| Base Counts Overall T | 1647365009 | 34.87 % | 1005290957 | 42.56 % | 642074052 | 27.18 % |
| Base Counts Overall N | 65480351 | 1.39 % | 31445699 | 1.33 % | 34034652 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 27146649 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 31081193 |
| 75 | 31081193 |
| Insert Size Histogram |
|---|
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