/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010461_1798703_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 97003846 | 100.00 % | 48501923 | 100.00 % | 48501923 | 100.00 % |
| General Reads | 88501403 | 91.23 % | 44724791 | 92.21 % | 43776612 | 90.26 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20 | 0.00 % | 10 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8502423 | 8.77 % | 3777122 | 7.79 % | 4725301 | 9.74 % |
| Bisulfite_reads C2T | 45802036 | 47.22 % | 23141579 | 47.71 % | 22660457 | 46.72 % |
| Bisulfite_reads G2A | 42699387 | 44.02 % | 21583222 | 44.50 % | 21116165 | 43.54 % |
| Concept | Value |
|---|---|
| Unique Fragments | 33270678 |
| Average Unique | 68.60 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2633230285 | 35.72 % | 1033276673 | 28.03 % | 1599953612 | 43.40 % |
| Base Counts Overall C | 992199911 | 13.46 % | 135987007 | 3.69 % | 856212904 | 23.23 % |
| Base Counts Overall G | 1059836499 | 14.38 % | 888528939 | 24.10 % | 171307560 | 4.65 % |
| Base Counts Overall T | 2585370587 | 35.07 % | 1579723858 | 42.86 % | 1005646729 | 27.28 % |
| Base Counts Overall N | 101655014 | 1.38 % | 48629671 | 1.32 % | 53025343 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 41449429 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 48501923 |
| 75 | 48501923 |
| Insert Size Histogram |
|---|
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