/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010462_1798704_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 12662048 | 100.00 % | 6331024 | 100.00 % | 6331024 | 100.00 % |
| General Reads | 10528429 | 83.15 % | 5337651 | 84.31 % | 5190778 | 81.99 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 26 | 0.00 % | 13 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2133593 | 16.85 % | 993360 | 15.69 % | 1140233 | 18.01 % |
| Bisulfite_reads C2T | 5435689 | 42.93 % | 2754701 | 43.51 % | 2680988 | 42.35 % |
| Bisulfite_reads G2A | 5092766 | 40.22 % | 2582963 | 40.80 % | 2509803 | 39.64 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3941233 |
| Average Unique | 62.25 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 327496809 | 34.03 % | 135084187 | 28.07 % | 192412622 | 39.99 % |
| Base Counts Overall C | 147125268 | 15.29 % | 35718638 | 7.42 % | 111406630 | 23.15 % |
| Base Counts Overall G | 159212389 | 16.54 % | 117526499 | 24.43 % | 41685890 | 8.66 % |
| Base Counts Overall T | 315195099 | 32.75 % | 186481451 | 38.76 % | 128713648 | 26.75 % |
| Base Counts Overall N | 13286083 | 1.38 % | 6347049 | 1.32 % | 6939034 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4991913 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 6331024 |
| 75 | 6331024 |
| Insert Size Histogram |
|---|
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