/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010463_1798705_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16673236 | 100.00 % | 8336618 | 100.00 % | 8336618 | 100.00 % |
| General Reads | 13904424 | 83.39 % | 7036029 | 84.40 % | 6868395 | 82.39 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 26 | 0.00 % | 13 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2768786 | 16.61 % | 1300576 | 15.60 % | 1468210 | 17.61 % |
| Bisulfite_reads C2T | 7205091 | 43.21 % | 3644605 | 43.72 % | 3560486 | 42.71 % |
| Bisulfite_reads G2A | 6699359 | 40.18 % | 3391437 | 40.68 % | 3307922 | 39.68 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5355287 |
| Average Unique | 64.24 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 394584667 | 31.14 % | 175797253 | 27.75 % | 218787414 | 34.53 % |
| Base Counts Overall C | 221860294 | 17.51 % | 80694575 | 12.74 % | 141165719 | 22.28 % |
| Base Counts Overall G | 236140799 | 18.64 % | 146474623 | 23.12 % | 89666176 | 14.15 % |
| Base Counts Overall T | 397113916 | 31.34 % | 222257781 | 35.08 % | 174856135 | 27.60 % |
| Base Counts Overall N | 17466260 | 1.38 % | 8358736 | 1.32 % | 9107524 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6660637 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8336618 |
| 75 | 8336618 |
| Insert Size Histogram |
|---|
 |