/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010464_1798706_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 9263406 | 100.00 % | 4631703 | 100.00 % | 4631703 | 100.00 % |
| General Reads | 6730504 | 72.66 % | 3406149 | 73.54 % | 3324355 | 71.77 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 8 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2532886 | 27.34 % | 1225546 | 26.46 % | 1307340 | 28.23 % |
| Bisulfite_reads C2T | 3483635 | 37.61 % | 1762471 | 38.05 % | 1721164 | 37.16 % |
| Bisulfite_reads G2A | 3246885 | 35.05 % | 1643686 | 35.49 % | 1603199 | 34.61 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2583115 |
| Average Unique | 55.77 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 226660990 | 32.20 % | 95203414 | 27.05 % | 131457576 | 37.34 % |
| Base Counts Overall C | 115830304 | 16.45 % | 34171415 | 9.71 % | 81658889 | 23.20 % |
| Base Counts Overall G | 124389749 | 17.67 % | 84897710 | 24.12 % | 39492039 | 11.22 % |
| Base Counts Overall T | 227427321 | 32.30 % | 133092631 | 37.81 % | 94334690 | 26.80 % |
| Base Counts Overall N | 9710492 | 1.38 % | 4644258 | 1.32 % | 5066234 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3216642 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 4631703 |
| 75 | 4631703 |
| Insert Size Histogram |
|---|
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