/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010465_1798707_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15765046 | 100.00 % | 7882523 | 100.00 % | 7882523 | 100.00 % |
| General Reads | 12379850 | 78.53 % | 6263376 | 79.46 % | 6116474 | 77.60 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28 | 0.00 % | 14 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3385168 | 21.47 % | 1619133 | 20.54 % | 1766035 | 22.40 % |
| Bisulfite_reads C2T | 6395018 | 40.56 % | 3234206 | 41.03 % | 3160812 | 40.10 % |
| Bisulfite_reads G2A | 5984860 | 37.96 % | 3029184 | 38.43 % | 2955676 | 37.50 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4802931 |
| Average Unique | 60.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 382361239 | 31.91 % | 163456284 | 27.28 % | 218904955 | 36.54 % |
| Base Counts Overall C | 200486428 | 16.73 % | 63230098 | 10.55 % | 137256330 | 22.91 % |
| Base Counts Overall G | 215740457 | 18.01 % | 143628972 | 23.98 % | 72111485 | 12.04 % |
| Base Counts Overall T | 383029842 | 31.97 % | 220852564 | 36.87 % | 162177278 | 27.07 % |
| Base Counts Overall N | 16525530 | 1.38 % | 7903830 | 1.32 % | 8621700 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5928376 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 7882523 |
| 75 | 7882523 |
| Insert Size Histogram |
|---|
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