/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010466_1798708_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17539770 | 100.00 % | 8769885 | 100.00 % | 8769885 | 100.00 % |
| General Reads | 13109392 | 74.74 % | 6637858 | 75.69 % | 6471534 | 73.79 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 46 | 0.00 % | 22 | 0.00 % | 24 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4430332 | 25.26 % | 2132005 | 24.31 % | 2298327 | 26.21 % |
| Bisulfite_reads C2T | 6770894 | 38.60 % | 3427439 | 39.08 % | 3343455 | 38.12 % |
| Bisulfite_reads G2A | 6338544 | 36.14 % | 3210441 | 36.61 % | 3128103 | 35.67 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5083724 |
| Average Unique | 57.97 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 422448555 | 31.69 % | 178952877 | 26.85 % | 243495678 | 36.53 % |
| Base Counts Overall C | 225808692 | 16.94 % | 69672066 | 10.45 % | 156136626 | 23.43 % |
| Base Counts Overall G | 241917493 | 18.15 % | 162439763 | 24.37 % | 79477730 | 11.92 % |
| Base Counts Overall T | 424472644 | 31.84 % | 246653417 | 37.01 % | 177819227 | 26.68 % |
| Base Counts Overall N | 18375136 | 1.38 % | 8793137 | 1.32 % | 9581999 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6286665 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8769885 |
| 75 | 8769885 |
| Insert Size Histogram |
|---|
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