/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010467_1798709_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16981688 | 100.00 % | 8490844 | 100.00 % | 8490844 | 100.00 % |
| General Reads | 13804484 | 81.29 % | 6995056 | 82.38 % | 6809428 | 80.20 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 43 | 0.00 % | 21 | 0.00 % | 22 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3177161 | 18.71 % | 1495767 | 17.62 % | 1681394 | 19.80 % |
| Bisulfite_reads C2T | 7140718 | 42.05 % | 3617259 | 42.60 % | 3523459 | 41.50 % |
| Bisulfite_reads G2A | 6663809 | 39.24 % | 3377818 | 39.78 % | 3285991 | 38.70 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5319561 |
| Average Unique | 62.65 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 415153548 | 32.17 % | 176453834 | 27.34 % | 238699714 | 36.99 % |
| Base Counts Overall C | 212377766 | 16.46 % | 64666918 | 10.02 % | 147710848 | 22.89 % |
| Base Counts Overall G | 228212850 | 17.68 % | 153937324 | 23.86 % | 74275526 | 11.51 % |
| Base Counts Overall T | 417056500 | 32.31 % | 241732263 | 37.46 % | 175324237 | 27.17 % |
| Base Counts Overall N | 17807624 | 1.38 % | 8513805 | 1.32 % | 9293819 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6592197 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8490844 |
| 75 | 8490844 |
| Insert Size Histogram |
|---|
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