/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010468_1798710_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17876242 | 100.00 % | 8938121 | 100.00 % | 8938121 | 100.00 % |
| General Reads | 12064028 | 67.49 % | 6109572 | 68.35 % | 5954456 | 66.62 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28 | 0.00 % | 14 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5812186 | 32.51 % | 2828535 | 31.65 % | 2983651 | 33.38 % |
| Bisulfite_reads C2T | 6237093 | 34.89 % | 3158340 | 35.34 % | 3078753 | 34.45 % |
| Bisulfite_reads G2A | 5826963 | 32.60 % | 2951246 | 33.02 % | 2875717 | 32.17 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4628537 |
| Average Unique | 51.78 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 443791772 | 32.67 % | 183467192 | 27.01 % | 260324580 | 38.32 % |
| Base Counts Overall C | 218253471 | 16.06 % | 61799048 | 9.10 % | 156454423 | 23.03 % |
| Base Counts Overall G | 232713715 | 17.13 % | 161891986 | 23.83 % | 70821729 | 10.43 % |
| Base Counts Overall T | 445098405 | 32.76 % | 263177270 | 38.74 % | 181921135 | 26.78 % |
| Base Counts Overall N | 18737029 | 1.38 % | 8961700 | 1.32 % | 9775329 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5738261 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8938121 |
| 75 | 8938121 |
| Insert Size Histogram |
|---|
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