/EXTERNAL BLUEPRINT/K010461_K010462_K010463_K010464_K010465_K010466_K010467_K010468_K010469_K010470_10_lane_gembs/EXTERNAL-K010469_1798711_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 34593920 | 100.00 % | 17296960 | 100.00 % | 17296960 | 100.00 % |
| General Reads | 28590388 | 82.65 % | 14449230 | 83.54 % | 14141158 | 81.76 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15 | 0.00 % | 8 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6003517 | 17.35 % | 2847722 | 16.46 % | 3155795 | 18.24 % |
| Bisulfite_reads C2T | 14803959 | 42.79 % | 7480282 | 43.25 % | 7323677 | 42.34 % |
| Bisulfite_reads G2A | 13786444 | 39.85 % | 6968956 | 40.29 % | 6817488 | 39.41 % |
| Concept | Value |
|---|---|
| Unique Fragments | 10932997 |
| Average Unique | 63.21 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 916621369 | 34.86 % | 351325814 | 26.73 % | 565295555 | 43.00 % |
| Base Counts Overall C | 371467358 | 14.13 % | 50304897 | 3.83 % | 321162461 | 24.43 % |
| Base Counts Overall G | 398072011 | 15.14 % | 334229458 | 25.43 % | 63842553 | 4.86 % |
| Base Counts Overall T | 906710897 | 34.49 % | 561366093 | 42.70 % | 345344804 | 26.27 % |
| Base Counts Overall N | 36266285 | 1.38 % | 17342698 | 1.32 % | 18923587 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 13587844 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 17296960 |
| 75 | 17296960 |
| Insert Size Histogram |
|---|
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