/EXTERNAL BLUEPRINT/K012131_1_lane_gembs/EXTERNAL-K012131_1895073_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 126317838 | 100.00 % | 63158919 | 100.00 % | 63158919 | 100.00 % |
| General Reads | 120346733 | 95.27 % | 60429938 | 95.68 % | 59916795 | 94.87 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5971103 | 4.73 % | 2728980 | 4.32 % | 3242123 | 5.13 % |
| Bisulfite_reads C2T | 62271188 | 49.30 % | 31262900 | 49.50 % | 31008288 | 49.10 % |
| Bisulfite_reads G2A | 58075547 | 45.98 % | 29167039 | 46.18 % | 28908508 | 45.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 46102181 |
| Average Unique | 72.99 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 3485417716 | 35.83 % | 1336928246 | 27.49 % | 2148489470 | 44.18 % |
| Base Counts Overall C | 1335093637 | 13.73 % | 145937811 | 3.00 % | 1189155826 | 24.45 % |
| Base Counts Overall G | 1367330063 | 14.06 % | 1193458165 | 24.54 % | 173871898 | 3.58 % |
| Base Counts Overall T | 3410330899 | 35.06 % | 2122517189 | 43.64 % | 1287813710 | 26.48 % |
| Base Counts Overall N | 128301211 | 1.32 % | 64395352 | 1.32 % | 63905859 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 56432780 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 63158919 |
| 76 | 63158919 |
| Insert Size Histogram |
|---|
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