/EXTERNAL BLUEPRINT/K012129_1_lane_gembs/EXTERNAL-K012129_1895071_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 76202210 | 100.00 % | 38101105 | 100.00 % | 38101105 | 100.00 % |
| General Reads | 72427261 | 95.05 % | 36373865 | 95.47 % | 36053396 | 94.63 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3774949 | 4.95 % | 1727240 | 4.53 % | 2047709 | 5.37 % |
| Bisulfite_reads C2T | 37530599 | 49.25 % | 18845548 | 49.46 % | 18685051 | 49.04 % |
| Bisulfite_reads G2A | 34896662 | 45.79 % | 17528317 | 46.00 % | 17368345 | 45.58 % |
| Concept | Value |
|---|---|
| Unique Fragments | 27202873 |
| Average Unique | 71.40 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2100477054 | 35.80 % | 810925242 | 27.64 % | 1289551812 | 43.96 % |
| Base Counts Overall C | 819271566 | 13.96 % | 111228268 | 3.79 % | 708043298 | 24.13 % |
| Base Counts Overall G | 837957075 | 14.28 % | 714371235 | 24.35 % | 123585840 | 4.21 % |
| Base Counts Overall T | 2033480244 | 34.66 % | 1259109961 | 42.92 % | 774370283 | 26.39 % |
| Base Counts Overall N | 76384231 | 1.30 % | 38150379 | 1.30 % | 38233852 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 33612542 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 38101105 |
| 76 | 38101105 |
| Insert Size Histogram |
|---|
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