/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012056_1894998_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012056_1894998_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19679804 | 100.00 % | 9839902 | 100.00 % | 9839902 | 100.00 % |
| General Reads | 15997300 | 81.29 % | 8101080 | 82.33 % | 7896220 | 80.25 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28 | 0.00 % | 13 | 0.00 % | 15 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3682476 | 18.71 % | 1738809 | 17.67 % | 1943667 | 19.75 % |
| Bisulfite_reads C2T | 8264981 | 42.00 % | 4184257 | 42.52 % | 4080724 | 41.47 % |
| Bisulfite_reads G2A | 7732347 | 39.29 % | 3916836 | 39.81 % | 3815511 | 38.78 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6173850 |
| Average Unique | 62.74 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 510999850 | 33.72 % | 201053453 | 26.54 % | 309946397 | 40.91 % |
| Base Counts Overall C | 230590144 | 15.22 % | 51388138 | 6.78 % | 179202006 | 23.65 % |
| Base Counts Overall G | 244894613 | 16.16 % | 185756344 | 24.52 % | 59138269 | 7.81 % |
| Base Counts Overall T | 508930209 | 33.59 % | 309552177 | 40.86 % | 199378032 | 26.31 % |
| Base Counts Overall N | 19930092 | 1.32 % | 9922342 | 1.31 % | 10007750 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 7648884 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 9839902 |
| 76 | 9839902 |
Insert Size Plot
| Insert Size Histogram |
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