/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012059_1895001_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012059_1895001_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17634400 | 100.00 % | 8817200 | 100.00 % | 8817200 | 100.00 % |
| General Reads | 14424631 | 81.80 % | 7322343 | 83.05 % | 7102288 | 80.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 21 | 0.00 % | 11 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3209748 | 18.20 % | 1494846 | 16.95 % | 1714902 | 19.45 % |
| Bisulfite_reads C2T | 7434049 | 42.16 % | 3771883 | 42.78 % | 3662166 | 41.53 % |
| Bisulfite_reads G2A | 6990603 | 39.64 % | 3550471 | 40.27 % | 3440132 | 39.02 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5585694 |
| Average Unique | 63.35 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 460393902 | 33.91 % | 182935739 | 26.94 % | 277458163 | 40.87 % |
| Base Counts Overall C | 203323778 | 14.97 % | 39279214 | 5.79 % | 164044564 | 24.16 % |
| Base Counts Overall G | 216665923 | 15.96 % | 170826296 | 25.16 % | 45839627 | 6.75 % |
| Base Counts Overall T | 459606498 | 33.85 % | 276992293 | 40.80 % | 182614205 | 26.90 % |
| Base Counts Overall N | 17858699 | 1.32 % | 8890858 | 1.31 % | 8967841 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6882501 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 8817200 |
| 76 | 8817200 |
Insert Size Plot
| Insert Size Histogram |
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