/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012060_1895002_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012060_1895002_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 16099794 | 100.00 % | 8049897 | 100.00 % | 8049897 | 100.00 % |
| General Reads | 13932273 | 86.54 % | 7081378 | 87.97 % | 6850895 | 85.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 4 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2167512 | 13.46 % | 968515 | 12.03 % | 1198997 | 14.89 % |
| Bisulfite_reads C2T | 7196696 | 44.70 % | 3656337 | 45.42 % | 3540359 | 43.98 % |
| Bisulfite_reads G2A | 6735586 | 41.84 % | 3425045 | 42.55 % | 3310541 | 41.13 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5342074 |
| Average Unique | 66.36 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 415745470 | 33.54 % | 168088698 | 27.12 % | 247656772 | 39.95 % |
| Base Counts Overall C | 189411194 | 15.28 % | 44658241 | 7.20 % | 144752953 | 23.35 % |
| Base Counts Overall G | 199773855 | 16.11 % | 149085146 | 24.05 % | 50688709 | 8.18 % |
| Base Counts Overall T | 418445720 | 33.75 % | 249888727 | 40.31 % | 168556993 | 27.19 % |
| Base Counts Overall N | 16307899 | 1.32 % | 8121257 | 1.31 % | 8186642 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6614454 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 8049897 |
| 76 | 8049897 |
Insert Size Plot
| Insert Size Histogram |
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