/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012061_1895003_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012061_1895003_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17533474 | 100.00 % | 8766737 | 100.00 % | 8766737 | 100.00 % |
| General Reads | 8356590 | 47.66 % | 4236582 | 48.33 % | 4120008 | 47.00 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 24 | 0.00 % | 11 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9176860 | 52.34 % | 4530144 | 51.67 % | 4646716 | 53.00 % |
| Bisulfite_reads C2T | 4310457 | 24.58 % | 2184553 | 24.92 % | 2125904 | 24.25 % |
| Bisulfite_reads G2A | 4046157 | 23.08 % | 2052040 | 23.41 % | 1994117 | 22.75 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 3213609 |
| Average Unique | 36.66 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 385835026 | 28.58 % | 173556328 | 25.71 % | 212278698 | 31.45 % |
| Base Counts Overall C | 269422709 | 19.96 % | 108056074 | 16.01 % | 161366635 | 23.90 % |
| Base Counts Overall G | 287884872 | 21.32 % | 167754308 | 24.85 % | 120130564 | 17.80 % |
| Base Counts Overall T | 389176230 | 28.83 % | 216834401 | 32.12 % | 172341829 | 25.53 % |
| Base Counts Overall N | 17758661 | 1.32 % | 8837638 | 1.31 % | 8921023 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 3973567 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 8766737 |
| 76 | 8766737 |
Insert Size Plot
| Insert Size Histogram |
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