/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012037_1894979_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 80188308 | 100.00 % | 40094154 | 100.00 % | 40094154 | 100.00 % |
| General Reads | 45859733 | 57.19 % | 23096970 | 57.61 % | 22762763 | 56.77 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 13 | 0.00 % | 6 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 34328562 | 42.81 % | 16997178 | 42.39 % | 17331384 | 43.23 % |
| Bisulfite_reads C2T | 23682116 | 29.53 % | 11925126 | 29.74 % | 11756990 | 29.32 % |
| Bisulfite_reads G2A | 22177630 | 27.66 % | 11171850 | 27.86 % | 11005780 | 27.45 % |
| Concept | Value |
|---|---|
| Unique Fragments | 17280858 |
| Average Unique | 43.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1911639005 | 30.96 % | 848510401 | 27.48 % | 1063128604 | 34.44 % |
| Base Counts Overall C | 1132176490 | 18.34 % | 430496153 | 13.94 % | 701680337 | 22.73 % |
| Base Counts Overall G | 1162115824 | 18.82 % | 719196676 | 23.30 % | 442919148 | 14.35 % |
| Base Counts Overall T | 1887103917 | 30.56 % | 1048393149 | 33.96 % | 838710768 | 27.17 % |
| Base Counts Overall N | 81464480 | 1.32 % | 40653479 | 1.32 % | 40811001 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 21395982 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 40094154 |
| 76 | 40094154 |
| Insert Size Histogram |
|---|
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