/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012072_1895014_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16277532 | 100.00 % | 8138766 | 100.00 % | 8138766 | 100.00 % |
| General Reads | 6036367 | 37.08 % | 3043911 | 37.40 % | 2992456 | 36.77 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 2 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10241159 | 62.92 % | 5094853 | 62.60 % | 5146306 | 63.23 % |
| Bisulfite_reads C2T | 3117697 | 19.15 % | 1571639 | 19.31 % | 1546058 | 19.00 % |
| Bisulfite_reads G2A | 2918676 | 17.93 % | 1472274 | 18.09 % | 1446402 | 17.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2289302 |
| Average Unique | 28.13 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 357685665 | 28.54 % | 178559080 | 28.49 % | 179126585 | 28.58 % |
| Base Counts Overall C | 257065288 | 20.51 % | 122353384 | 19.52 % | 134711904 | 21.50 % |
| Base Counts Overall G | 262337438 | 20.93 % | 137015657 | 21.86 % | 125321781 | 20.00 % |
| Base Counts Overall T | 359747011 | 28.70 % | 180506171 | 28.80 % | 179240840 | 28.60 % |
| Base Counts Overall N | 16534562 | 1.32 % | 8250690 | 1.32 % | 8283872 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2849475 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8138766 |
| 76 | 8138766 |
| Insert Size Histogram |
|---|
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