/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012073_1895015_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18938278 | 100.00 % | 9469139 | 100.00 % | 9469139 | 100.00 % |
| General Reads | 9177331 | 48.46 % | 4624152 | 48.83 % | 4553179 | 48.08 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 17 | 0.00 % | 9 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9760930 | 51.54 % | 4844978 | 51.17 % | 4915952 | 51.92 % |
| Bisulfite_reads C2T | 4727524 | 24.96 % | 2381342 | 25.15 % | 2346182 | 24.78 % |
| Bisulfite_reads G2A | 4449824 | 23.50 % | 2242819 | 23.69 % | 2207005 | 23.31 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3506725 |
| Average Unique | 37.03 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 422110212 | 28.95 % | 196872276 | 27.00 % | 225237936 | 30.89 % |
| Base Counts Overall C | 294095362 | 20.17 % | 127889714 | 17.54 % | 166205648 | 22.80 % |
| Base Counts Overall G | 303454059 | 20.81 % | 170694984 | 23.41 % | 132759075 | 18.21 % |
| Base Counts Overall T | 419348129 | 28.76 % | 224064865 | 30.73 % | 195283264 | 26.78 % |
| Base Counts Overall N | 19239644 | 1.32 % | 9601864 | 1.32 % | 9637780 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4332456 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9469139 |
| 76 | 9469139 |
| Insert Size Histogram |
|---|
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