/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012074_1895016_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 21398414 | 100.00 % | 10699207 | 100.00 % | 10699207 | 100.00 % |
| General Reads | 10443508 | 48.81 % | 5263154 | 49.19 % | 5180354 | 48.42 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10954896 | 51.19 % | 5436048 | 50.81 % | 5518848 | 51.58 % |
| Bisulfite_reads C2T | 5384416 | 25.16 % | 2712935 | 25.36 % | 2671481 | 24.97 % |
| Bisulfite_reads G2A | 5059102 | 23.64 % | 2550224 | 23.84 % | 2508878 | 23.45 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4021903 |
| Average Unique | 37.59 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 482901814 | 29.31 % | 222512692 | 27.01 % | 260389122 | 31.61 % |
| Base Counts Overall C | 326060375 | 19.79 % | 137508570 | 16.69 % | 188551805 | 22.89 % |
| Base Counts Overall G | 335942534 | 20.39 % | 193126569 | 23.44 % | 142815965 | 17.34 % |
| Base Counts Overall T | 481037511 | 29.19 % | 259842994 | 31.54 % | 221194517 | 26.85 % |
| Base Counts Overall N | 21735644 | 1.32 % | 10848114 | 1.32 % | 10887530 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4955576 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10699207 |
| 76 | 10699207 |
| Insert Size Histogram |
|---|
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