/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012075_1895017_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 21686310 | 100.00 % | 10843155 | 100.00 % | 10843155 | 100.00 % |
| General Reads | 10322031 | 47.60 % | 5197320 | 47.93 % | 5124711 | 47.26 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 3 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11364274 | 52.40 % | 5645832 | 52.07 % | 5718442 | 52.74 % |
| Bisulfite_reads C2T | 5329508 | 24.58 % | 2682651 | 24.74 % | 2646857 | 24.41 % |
| Bisulfite_reads G2A | 4992528 | 23.02 % | 2514672 | 23.19 % | 2477856 | 22.85 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3967688 |
| Average Unique | 36.59 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 482876679 | 28.92 % | 222605265 | 26.66 % | 260271414 | 31.17 % |
| Base Counts Overall C | 337940783 | 20.24 % | 147003232 | 17.61 % | 190937551 | 22.87 % |
| Base Counts Overall G | 347081438 | 20.79 % | 195256401 | 23.39 % | 151825037 | 18.18 % |
| Base Counts Overall T | 479912217 | 28.74 % | 259060952 | 31.03 % | 220851265 | 26.45 % |
| Base Counts Overall N | 22034753 | 1.32 % | 10997085 | 1.32 % | 11037668 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4902982 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10843155 |
| 76 | 10843155 |
| Insert Size Histogram |
|---|
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