/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012076_1895018_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20193052 | 100.00 % | 10096526 | 100.00 % | 10096526 | 100.00 % |
| General Reads | 10304961 | 51.03 % | 5195488 | 51.46 % | 5109473 | 50.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 13 | 0.00 % | 5 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9888078 | 48.97 % | 4901033 | 48.54 % | 4987045 | 49.39 % |
| Bisulfite_reads C2T | 5315831 | 26.33 % | 2679361 | 26.54 % | 2636470 | 26.11 % |
| Bisulfite_reads G2A | 4989143 | 24.71 % | 2516132 | 24.92 % | 2473011 | 24.49 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3935861 |
| Average Unique | 38.98 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 450799465 | 28.99 % | 209475936 | 26.94 % | 241323529 | 31.04 % |
| Base Counts Overall C | 312918317 | 20.13 % | 136381348 | 17.54 % | 176536969 | 22.71 % |
| Base Counts Overall G | 325746840 | 20.95 % | 182805212 | 23.51 % | 142941628 | 18.39 % |
| Base Counts Overall T | 444877567 | 28.61 % | 238530022 | 30.68 % | 206347545 | 26.54 % |
| Base Counts Overall N | 20522815 | 1.32 % | 10239984 | 1.32 % | 10282831 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4859831 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10096526 |
| 76 | 10096526 |
| Insert Size Histogram |
|---|
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